01670nas a2200289 4500008004100000022001400041245011900055210006900174260001200243300001200255490000600267520076600273653004001039653002501079653002201104653002401126653001301150653002801163100002201191700001701213700001701230700002701247700002101274700001801295700001901313856004801332 2008 eng d a1750-279900aSPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs.0 aSPIDER image processing for singleparticle reconstruction of bio c10/2008 a1941-740 v33 a
This protocol describes the reconstruction of biological molecules from the electron micrographs of single particles. Computation here is performed using the image-processing software SPIDER and can be managed using a graphical user interface, termed the SPIDER Reconstruction Engine. Two approaches are described to obtain an initial reconstruction: random-conical tilt and common lines. Once an existing model is available, reference-based alignment can be used, a procedure that can be iterated. Also described is supervised classification, a method to look for homogeneous subsets when multiple known conformations of the molecule may coexist.
10aImage Processing, Computer-Assisted10aMicroscopy, Electron10aModels, Molecular10aMolecular Structure10aSoftware10aUser-Computer Interface1 aShaikh, Tanvir, R1 aGao, Haixiao1 aBaxter, Bill1 aAsturias, Francisco, J1 aBoisset, Nicolas1 aLeith, ArDean1 aFrank, Joachim uhttp://www.ncbi.nlm.nih.gov/pubmed/19180078